YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PET494
Protein type:	Transmembrane
Type Confidence:	0.79
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLKKGKRSI STVWRLLWKR FYSVNSKTNM HFSRSRKKPV TNFTRTNGLL LSCNGDTFPY  60
   61 LRTLWRYFNA PGNLMFVTTN IVAFMGIVTY NTLVTISSER AFEEQMMAAQ VSLAKQREEL 120
  121 ETTALSLPRD IELRGEEDDI KWEQPDVAHV REDPLVEEQN AKLDTPIKQY TLGDLILNKR 180
  181 ENVTDYDSQR AKASIFHMLY AYMLYRDVIQ PTTMTQNNNS EEWRREVELL TKGKEVQGTH 240
  241 RRIDVFYDLW NKNFDKIVTS PEKVQNFQLP NWSKYPTILK FICTELHDNS LKTLGEFKQF 300
  301 YGKVRSNEVK KLLGLWLYDH SFLFPHNIYD NRTEEDFYDI LINDSMQDNR IFQKYSSIVM 360
  361 NPYNERTQLF FPNVNSPSVN KPVPSISLET YTRLLKGYIN LQETGCKYDY NDNIFKLISI 420
  421 LKLNCFLQRN KKKHAGPTVR ILLPRDEDRS QILGTISQAE KRTCYQILSK NRDVVALLKR 480
  481 ISDIQADSS

Type	Start	End	Confidence
Cytoplasmic	1	71	0.75
Transmembrane Helix	72	90	0.74
Non-Cytoplasmic	91	489	0.96