YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YNR021W
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSIFGPLT GFLERVNSLN APYQALSYDE QKAMTIWQRV KFYNWTFELC ALGVLFLVYA  60
   61 FYKFGNSVNL KRGNQIFQSL HSFLANDLKF SRVGFNINDS KIFTVEHQNT WFSSFATGRS 120
  121 AIKSINLNLH LVARSNPFSM CLEYLLGFFF ASLKSKQLEE FMEIVIRPNG ILVTSESAHP 180
  181 NKNAHEILTK FRFVTSIVNK EFMNQARTEN YFLSIAHTSE NDKLPNNFVY MSDVNQLSGF 240
  241 MFHYSKPYEV LSQAGNLLKY ISFTDLPVNP PRDDKEWESS IEPKAIIRCA VPQNENELKL 300
  301 LNQIISLVVE IYDGFTQDLV QQSPNLFITN DILKRTTNLR QQELNKIKKF MKETELELAK 360
  361 EKKLELEKAK RRQLKASGQQ EKVDQKMKEK RERRLKNKQR TRFQ

Type	Start	End	Confidence
Cytoplasmic	1	41	0.87
Transmembrane Helix	42	62	0.86
Non-Cytoplasmic	63	404	0.94