YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AIM38
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKILTQDEIE AHRSHTLKGG IEGALAGFAI SAIIFKVLPR RYPKFKPSTL TWSIKTALWI  60
   61 TPPTVLTAIC AEEASNNFDA TMYGSGSSSE DALDEHRRWK SLSTKDKFVE GLSNNKYKII 120
  121 TGAWAASLYG SWVIVNKDPI MTKAQKIVQA RMYAQFITVG LLLASVGLSM YENKLHPNKQ 180
  181 KVNEMRRWEN ALRVAEEEER LEKEGRRTGY VSNEERINSK IFKS

Type	Start	End	Confidence
Non-Cytoplasmic	1	18	0.59
Transmembrane Helix	19	38	0.77
Cytoplasmic	39	151	0.47
Transmembrane Helix	152	171	0.66
Non-Cytoplasmic	172	224	0.69