YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MRPL10
Protein type:	Transmembrane
Type Confidence:	0.68
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAERQTGLR NSFTTVIGRK LINTFVPSMM LTSVAGNDIF FRGLFKSPVL AFQSYRYVSI  60
   61 LGQLKPSDGS TKSFKRLGRG PSSGLGKTSG RGQKGQKARG KVKSWFEGGQ TPIYKLFPKI 120
  121 GFTNVGAKPL KELNLKRIQW FHDKNRLHLQ PGEVLDMNKM RKLGLVTGPI KYGVKILASG 180
  181 KFHYNLPIAL EASRASAKAI AAIEKAGGKF TARYYTPLGL RAHLNPQWFL EKRGRVPLQA 240
  241 RPTKRRDIDF YSKEEKRGYL VMEKDKLLQD IKEAQNKGSR HFLKQNVKKS SLEIELEELS 300
  301 PEKDWVPVVS NSKVMNIKAL DH

Type	Start	End	Confidence
Cytoplasmic	1	20	0.65
Transmembrane Helix	21	40	0.66
Non-Cytoplasmic	41	322	0.99