YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YNL228W
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVWCHYILLV LTFFLFTTFF TAACPAIFTW LNSLFRLSND SPHVVHTSIA EVGDIEDGRV  60
   61 DKDGVLFVDL EFFLGCLPFF FFALVDQSSS SSVCKPLSPS DAKRSSNSLL RLSLVSSNDS 120
  121 DSSVSVSTFA FFFFFLFFLF FVFTCTFSSE LTSSTSISIS MLRLSSSLSS SEDDSASFLS 180
  181 ISASSACNAC RSISSFSLTL SSAESNFSRS ERLSNPSVMF SSSISFRISS IFFLCSLVFM 240
  241 WFFNCFSDLN VLLQIKHS

Type	Start	End	Confidence
Cytoplasmic	1	6	0.48
Transmembrane Helix	7	31	0.83
Non-Cytoplasmic	32	125	0.61
Transmembrane Helix	126	148	0.85
Cytoplasmic	149	223	0.70
Transmembrane Helix	224	243	0.91
Non-Cytoplasmic	244	258	0.68