YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YNL217W
Protein type:	Transmembrane
Type Confidence:	0.74
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDKRKRRAA TLSTALILFV ACCVYTLYIF KFDNPRLSPP VSLLPTISTL KKIEHVTDLN  60
   61 KEYVFVGDVH GNYDEFIELI DDKIGGLGEN ITMILLGDFI HKGPDSDKVV SYILNHKDQV 120
  121 KCVLGNHEIL VMMAYLNPDF SKWVRRPKLM TPLTFSTETN FIPQDISKIS NAHGRLAREL 180
  181 GFSKLSQLAE HCSMAIELDL DITGDILFGA HAGMVPGDFM KPNQIPGVSS LSNMKYVDKK 240
  241 NWSKTSREKE NKNYVRWYTL WDKYGDHFSN AKVFYGHDAS MGLNLRRQTK GLDTACIKNN 300
  301 LLSSMKVKYD IKKGQYDYEL IQVQCS

Type	Start	End	Confidence
Cytoplasmic	1	8	0.72
Transmembrane Helix	9	29	0.69
Non-Cytoplasmic	30	326	0.99