YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PEX17
Protein type:	Transmembrane
Type Confidence:	0.76
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSINSFPRN IDWPSNIGIK KIEGTNPTVN AIKGLLYNGG SIYAFLYFVI AMFVEPTLQK  60
   61 QYQQRNDFSL FVLLRLRRII AQLQKRLVMT PVSSLGFNEQ NNFVERSTQT SDDNIIREDN 120
  121 SHWAEMIYQL QNMKQELQYF NRSSGQPSES IDDFVFQIKM VTDQVELTDR SRAFSNKSRN 180
  181 IIQGIREIKG WFVNGQVPR

Type	Start	End	Confidence
Cytoplasmic	1	33	0.66
Transmembrane Helix	34	54	0.69
Non-Cytoplasmic	55	199	0.91