YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|113525855, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELTTTIFYV FALVLVLSAL KVITAKNPVH SALFLVLSFF TAAAIWMLLK AEFLAILLVL  60
   61 VYVGAVMVLF LFVVMMIDID IEHLRRDFWT YVPMASVVGA LIIAEMAIVL VRNFIGTTTP 120
  121 VATNGSQDPG YSNTAALGKL IYTDYIYAFE VAGIILLVAI IAAVALTLRR RKDVKAQDVS 180
  181 AQLRTRRDER VRLVPMQSEG QTQQTEAAAA ANKN

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.83
Transmembrane Helix	6	24	0.88
Cytoplasmic	25	30	0.78
Transmembrane Helix	31	49	0.93
Non-Cytoplasmic	50	54	0.79
Transmembrane Helix	55	77	0.92
Cytoplasmic	78	87	0.91
Transmembrane Helix	88	111	0.89
Non-Cytoplasmic	112	145	0.95
Transmembrane Helix	146	168	0.92
Cytoplasmic	169	214	0.99