YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YNL194C
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYKKFVYFI NLFFLLGATL LTFFLILAGG RTTGVLKNFY WFQASTSGFN SAPSVTRWYN  60
   61 YNWCGWESRG IAVNCSSKMA AQPFSPRDNF GSSPLMPSTF LNNRNAYYYL SRVGWAMLLI 120
  121 GLFFLLITLV SVIASLIRYN RRTAALATAM SWITLFFITL SACLYTGCYA KAVKAFHHEN 180
  181 RDARLGPKNF GLIWTTVFLL IVNAICCTIM VATHKRNEYI YDRSFASTKT VDSQTPTPVP 240
  241 TNGGIPSSVP VTEVQQSQSH QNHRFFKKLR TKKRTVTSAG DEPDRVQEER VYTEQNVPVV 300
  301 S

Type	Start	End	Confidence
Cytoplasmic	1	6	0.88
Transmembrane Helix	7	30	0.89
Non-Cytoplasmic	31	114	0.83
Transmembrane Helix	115	137	0.91
Cytoplasmic	138	147	0.72
Transmembrane Helix	148	169	0.90
Non-Cytoplasmic	170	189	0.81
Transmembrane Helix	190	213	0.90
Cytoplasmic	214	301	0.87