YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|190409169
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFSSVTAIT LATVATVATA KKGEHDFTTT LTLSSDGSLT TTTSTHTTHK YGKFNKTSKS  60
   61 KTPNHTGTHK YGKFNKTSKS KTPNHTGTHK YGKFNKTSKS KTPNHTGTHK YGKFNKTSKS 120
  121 KTPNHTGTHK YGKFNKTSKS KTPNHTGTHK YGKFNKTKHD TTTYGPGEKA RKNNAAPGPS 180
  181 NFNSIKLFGV TAGSAAVAGA LLLL

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	204	0.99