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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TDA7
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSNSTIGRT TLGESDTISL SFSEPSSSLN SRSTDVVFAS TSTLVPQQGS LTSLPPVSST  60
   61 ATPTYYSTSL TYDETLHTSI DVSSTSTLVS STDSSSSSEQ DTYSSQYDPA TSSYSIITPS 120
  121 MSIFSSTSPM SSSSSITSEW SSLTSTTPTL SSSATSLSSS WSSLSSPSSL LVSSSLSLSL 180
  181 SSSYSDTKLF SFDSRSSIFS PSTPTVISPS YTYLSSISAT SFQISTTSEL SSSWFSTISS 240
  241 PSTISNKDTT CPSSSRNTST SFYSSSLSST NDFSTISKSS KLSPSASSST VSISTISVPT 300
  301 SSSVSSSSSK VPSNRPSSSS SSDDTTSAYS STYTFQSLQS TTSSSIPPTT QTPSTSTIST 360
  361 SPIPTSSQVF NTVAISSSED SKTIYYFYTQ TYDITDSSTT FVTGLPTTIA VAKSEVTSFS 420
  421 APSSTITADM SFYQHWLDGS LDNNKNQGTS KTNTGTIVGS VVGSVGGILI CVLVVWFMLV 480
  481 RKRKAKRHFK ENDSFCHEIG RRTGFPTTAQ AKEASLQAQD SGSQQRNTET ASANNPFSNE 540
  541 FNFKARGNPP PVPPPRNVTA MNGSFQNMRS NFMDQENRFS YGSSFTYSSL GSSTQGGFST 600
  601 LSSNSIRLGR GLDNDISHDE RNTVQNNSQG FLREII

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle