YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YNL174W
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALEFLAATR GMDNLVMSCS VTLLFSSSLS FVLAIKNLTK SSFVVSKDKL PIQTPYLFSS  60
   61 FFFFFTTSPD SSPVGVLIVD SSPWASFSEA PDFFFSASSL YSSIDLGSIL YFAFNSSRVT 120
  121 LPLLKRRFCF FDRGMELFRS ISISSSAFLF FVGSSKAFLT CSSLSFFVTA SSFDSSVSDI 180
  181 LSQIIESCWV

Type	Start	End	Confidence
Non-Cytoplasmic	1	14	0.72
Transmembrane Helix	15	35	0.89
Cytoplasmic	36	55	0.66
Transmembrane Helix	56	77	0.67
Non-Cytoplasmic	78	92	0.91
Transmembrane Helix	93	115	0.82
Cytoplasmic	116	136	0.84
Transmembrane Helix	137	159	0.79
Non-Cytoplasmic	160	190	0.81