YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ASI2
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.37
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARPQNHRRS NWTERDDNDD YLFQRFLEES ETRHSREPSP VTEQSQQELQ QDVQQAIDGI  60
   61 FNSLRRNMSS TSNINRAANM DATTNGNGGI NADTIRATNA NTADSPFTAR QQSPLRTFLR 120
  121 NLFILDYFIG LILFPFSVYN ILRSGFNSMT FSENDFIIEI VGYWKFAKIF GSGGTTLIAY 180
  181 KDTGKLGLLG KFHNIIVFYS SPVIKHIMKS RDGNEPNLNW IRLMFAKAFE LFVKVSTILI 240
  241 YLAYGVSGTV YMVTAGFFFV LCLLFTVIRR YKGVHRMLVS QRITGPGVF

Type	Start	End	Confidence
Cytoplasmic	1	121	0.79
Transmembrane Helix	122	142	0.90
Non-Cytoplasmic	143	188	0.60
Transmembrane Helix	189	203	0.37
Cytoplasmic	204	222	0.66
Transmembrane Helix	223	243	0.70
Non-Cytoplasmic	244	249	0.62
Transmembrane Helix	250	268	0.94
Cytoplasmic	269	289	0.92