YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YNL109W
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKCIMRSTE FKTHFSFHSI FSFPLSAALL ALISASEPAS KAFINVQFIS SPLVKKEVLP  60
   61 FIVSFHSLSS NGILSFSPFT SSNLSIAQLP FLIKVPLLSM GSLALENFNK FIPRADLVAA 120
  121 WVTIIMVFTF GNFLSTLSIK TGQNLWHLSK ISSSVSPLLL GIILGSQSGE IMLGKNLLIT 180
  181 S

Type	Start	End	Confidence
Cytoplasmic	1	14	0.80
Transmembrane Helix	15	35	0.83
Non-Cytoplasmic	36	83	0.73
Transmembrane Helix	84	105	0.65
Cytoplasmic	106	116	0.64
Transmembrane Helix	117	139	0.89
Non-Cytoplasmic	140	145	0.69
Transmembrane Helix	146	174	0.63
Cytoplasmic	175	181	0.60