YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115495527, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFRAARLAV LQLLRTVAPA DLPALLQWMR TTRDFDEFTQ DNNDIMLKNI AEDLRNCLPL  60
   61 ETMLSSEHLA LQKIQQQPEP TVHVDAFLYD EDFIDSLCEE GKMSRNYCVV CGSHQTAPLG 120
  121 FISHSFSLME LKFIYHHVLP DLSGKVLVDV GSRLGTVLYG GYLYSSASQL YGVELNGDFC 180
  181 QLQEMVIKKY QFTDRIKVLH ADICTQGSLL QNADVIIMNN VFEYFLNEAE QARAWEYICH 240
  241 NVRKQGSLLV TVPGLEDSLS GLQVNIQLSP WVEEIPLNYD VFPEKDIDRE ALEQIHLYKI 300
  301 L

Type	Start	End	Confidence
Signal Peptide	1	20	0.85
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	301	0.99