YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|113680763, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWSLIGILSA ANVFCVYGTS LVPVHVPCDD KTVEKLSRLA VTYINEDRQT GYKFALNRIT  60
   61 NVQANQQGPA GKVYYLDLDV LETKCHVLSP KSWKKCAVRP FMETQISGNC NTTVLHTPEG 120
  121 FSYLYSYDCT LVPDPPEKLR LTCPDCPLLL PVDGVEAAAA ARAALLKYNT QSTLPASLTV 180
  181 HSITRASQQS TPFPASFVEF IVQECSEVQC APALEGKEPV GFCVGTVFGT GHGLQDVKVS 240
  241 CEMFRPQAHV VSPTHLEEKS STVSKTPTLD VHVPHNPEPS FQEGGAETPQ FADPVHQAIP 300
  301 AGPGSQPTSS SESSESSETS SSEETNSSVR AVKPPLNFRY VLQRQKRQTV SSTAAPHTPV 360
  361 FLSVFPSVPS PFRSCPGVSR YTTV

Type	Start	End	Confidence
Signal Peptide	1	15	0.80
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	384	0.99