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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113681935, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKYIERIRN VIPGMRRRDS NVPHQGDVAV DMGEADFGKK ENQKMSIYNP LDPVPKYDFY  60
   61 AKDTWAGRIK KSRPSLDVLR NPPDDITPTP DEEDGRPKVK LVRFGWVLGV WIRCMLNIWG 120
  121 VIMYLRLPWV TSQAGLVLTF VIIFMSVTIT TITATSVSAI STNGKVYSGG TYFMISRSLG 180
  181 PELGAPIGLL FAFACSIACA LHTVGFSETV RDMLKDFKSQ MVDDVNDVRI IGAITVTICL 240
  241 LITFAGMAWE AKAQILFFIA IILSLLNYFV GTVIPPTQEK EAVGFFGYHS DIFVSNLLPS 300
  301 FRGPSGSFLV VFAIFFPACT GILSGVNICG DLKDPTGGIP KGTLLSILCT TLSYLLIAAT 360
  361 CAATVVRDAS GNKNDSLAIS NYTIHCSGLG CKYGWNFDSC EQYRNCTQGL ANNLRILTVV 420
  421 SGWGILITIG TFAATLSSAL GFLVSAPKVF QLLCKDKIYP YIGFFGKGYG KNKEPLRAYV 480
  481 LTFIIAMCFI LIGNLNTIAP LISNFFLASY GLINFSCFHA SITKSPGWRP QYRYYSPWLS 540
  541 LFCCCLSFTL MFLFTWWAAL VTFSVVLFLI GYVNYKKTYV NWGSSYQAAF YNMALNFSMN 600
  601 LTTVPDHVKN FRPQCLVLSG PPNTRPALVD FVGTFTKNVS LMICGNITIE GEQSDFPEHS 660
  661 SDLVVEWLTK RKVRSFYTTF AAESLQDGAH NLMLASGLGK LKPNTLVLGY KTNWQECKPE 720
  721 SLQDYINTIN DAFDSNYGVA LLRMMDKLDI TDDMYSAEDG LSAIDNPAFE RDEVPQSRSD 780
  781 TIDRDSDNSD EESSDQIRTV FQAKQGKKTI DIYWISDDGG LTLLVPYLLT RRNRWKKSKI 840
  841 RVFILGDQET KKEDRDDMKM LLKRFRLEIE EVIVITDVDK PPLAKNVQRF EDTITPFRLS 900
  901 EEQTRVDLQE FRRLNPWAVS DKDLEAVRPK VERTVRLNEI IKKNSLYAAL VVVSLPVPDL 960
  961 NCPSSLYMAW MDALSIGINC PALLIRGNQE NVMTFYCQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle