YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|66239693, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSVYENSVF AFSTGHFSNY RESKREVNTA KWTKVLLIVF AVSLVFALGG LCAVRIQYVS  60
   61 VSAQLSAQET NGTIMSRQLD KLTANFTTVR DHLHINELLM KELTANYSRV KEQLSISEET 120
  121 VRKLSRFNQS SGCAICAIHW THSGEKCYYF STVKMNWTQS RDHCVTKGGH LMIITSQAEQ 180
  181 EFLTSNVKET HWIGLNDLDT EGRWLWVDNQ PLSQTEEFWM KRENGVSEPD NWTKQHVDGE 240
  241 DCASLGHPDG ETDFWTDAYC FEEKRFVCEA AAAV

Type	Start	End	Confidence
Cytoplasmic	1	34	0.92
Transmembrane Helix	35	56	0.92
Non-Cytoplasmic	57	274	0.97