YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YNL058C
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKKNFIPSV SLVRRDLPTL VTTTTSSTAL SKPTSSVVSE TSSKSLPSLT SSAFSTSSGA  60
   61 TSSSSLIVAS ITPPSTAGNP FILNAADKPN GTVYIAVGAV IGAIFISILI WWLVSSYLSR 120
  121 RFTMTNSYAN DSKNLYRGHH KHSSSLQSNP FDINDEKSYM QDDWDSMSQL ESSQYEDAAS 180
  181 PFNPIQDPFT DNRRSLFISP TLQVSQYEKS HSRHQSKDTN IFIDDPFLYV GTYLEEEEEE 240
  241 EEERKLNLNR PQRAASPERK EKKINSMEGY HKRNQSSLGL IPVASATSNT SSPKKAHKRQ 300
  301 APSMFLDDVL NGREII

Type	Start	End	Confidence
Cytoplasmic	1	52	0.88
Transmembrane Helix	53	72	0.72
Non-Cytoplasmic	73	91	0.68
Transmembrane Helix	92	114	0.94
Cytoplasmic	115	316	0.79