YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|190409038
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHVSKRSIG QFFKRKTSTV DGSKSQKCGT TNQLRKLLHK RRVQKQAVPV ESQYRIPGDF  60
   61 RDNQSVRVKN SMYNSSPSVT PSTHHINERY VRYDINTRPL VVVLAISIVF FGCLLVLKDI 120
  121 IIQSSENILS VSKWKIIGAS FMGTPYTGLL TGLVGPLLSP FSAVSSWLSF IF

Type	Start	End	Confidence
Cytoplasmic	1	98	0.84
Transmembrane Helix	99	122	0.88
Non-Cytoplasmic	123	145	0.77
Transmembrane Helix	146	170	0.79
Cytoplasmic	171	172	0.69