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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|165993307, gi...
Protein type: Transmembrane
Type Confidence: 0.76
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIRKVHLKG PGTVLLTMMM FKWGIFCSGS SDLCASSPCQ NGATCVDTMD DYVCLCSREG  60
   61 VRYMGRDCEE LYNACMFAEC EGCESELGTD HYTCPEDKDE CKSGPCVGPH SECVNEQNGY 120
  121 KCLCPPGFGG EDCSHRITDC IDEPCLNNGT CRRIVDGFEC ACSDGFRGET CEEDLDECDS 180
  181 HPCQNGAICL DGVNKYQCFC VPGYQGHNCE IDINECASRP CWNNGTCING KDRYLCDCLL 240
  241 GYTGVNCELE IDECESNPCQ NGATCHDLVG LYTCDCVQGF EGSDCEINID ECESGPCQNG 300
  301 GLCHDRIDSY ECECEGTGYM GDHCEEDIPE CASHPCQHGG TCLEGINHYN CSCWPGFEGG 360
  361 NCEVDIDECA DAPCENDGEC FEKSNPEHWE TDWEFTYATA VGYVCQCQPG YTGENCSVNI 420
  421 NECVSEPCHN GGSCKDLVNG YMCECPEGFT GVECEVNIDE CESAPCLNGG VCEDGVAEYK 480
  481 CHCAEAEEGL LPWGGPQCTV QLLGCIGHEC QNGATCLPWL DGETHGHTCL CPPGFYDDVC 540
  541 SIQTTFSFSS PRFFLIELPS LERRRRETEP EHPLGVRLRF RTTLPDMLLF FRGNAEFFLS 600
  601 LEIVGGELRA RATSKEEGSL EAQLPGLVSD GDWHEAIVNI NEHDIRLVLQ VKGANCNNQA 660
  661 CRVEDKLQDG HETFLHHDSL TKVYVGGVPE EYIGLTLSGQ GFLGCMEDLQ VDGHPVLPHD 720
  721 LGHEEESVEL GCVKTEWCQE DPQPCSQQGH CVDLWTSYRC DCYRPHYGQD CSKDMPTWTF 780
  781 GHENSTSFLA FELLSDFGSN FSVSFFLRSL KSSGLLFQLR RSGVQGTEDE PYFTIYLEMG 840
  841 RLQVTSMAES PILSSPVFVS NGEKPLLQVD IQDGQVFFNH GGYRYGLGLL PDLEVLEGDL 900
  901 LYIGGVPGEE GATVWGGHFK GCLQDLRLDD VHLDVEDWNN TLSESIYIAS DSENVLPGCT 960
  961 SDDTCKMEPC LNGGACTVTW NDFICSCPKD FTGKTCETRV WCVSDPCING GHCVDLLDGF1020
 1021 ECIANATFDN TPLHYSAKGS LLDPVTNVTM KLRTRQENGV LLRAWRGEEL LLIGLLDSSI1080
 1081 HVEIHTANSV EPVKFSGQRR IADGNWHRLL FAMAHPEHDA SQWFVLVDGI IDGSSAPVLA1140
 1141 GSLNFLKDIS SEVALAETFT GCLGAVRVGG VYLPFVDNTK SPQTTRFWRR PDEHVHLGCF1200
 1201 GAPVCRSHPC RRGGTCVDLF NKFGCKCPSG WEGNICEKEI DECISGPCLH GKCKDKLNGF1260
 1261 DCLCHPGYAG PTCSENIDDC KGSRCKNGGT CVDGVNDFTC ICPPKYSGTR CQYNYPPLKC1320
 1321 ALDVECENDG VCHDTPWGAN CTCPPGFTGE RCEREIDECA SSPCLNGGSC LDRLNRFQCL1380
 1381 CPAGFSGQFC ETNKQAQQDH IPWLAIAVPL ACGCILLVAI GLIFMLMTAR KKRQSEGTYS1440
 1441 PSHQEVAGAR LEMDSMLKVP PEERLI

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