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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|94732204, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLQSARSPF SVSSLSNGDD RKFSLGGCSS YDTDSVASRS SGVFSGYDTL DAPPSYDFYT  60
   61 NTEVFGRAKK SRPSLFELHS NPQDDPSPPP LYEESSVDKQ SPEDEDEPTE PPPEPARFGW 120
  121 AQGVMIRCML NIWGVILYLR LPWITAQAGI GLTWIIILVS SSITGITGLS TSAIATNGKV 180
  181 KGGGTYFLIS RSLGPELGGS IGLIFAFANA VAVAMHTVGF AETVQVLMQE TEVSMVDKLN 240
  241 DIRIIGVITV TCLLAISMAG MEWESKAQVL FFFVIMISFA SYIIGTIIPA TPQKQARGFF 300
  301 SYRADIFATN FVPGWRGPEG SFFGMFSIFF PSATGILAGA NISGDLKDPN VAIPRGTMLA 360
  361 IFWTTVSYLI ISATIGSCVV RDASGDVNDT ISSLTGECLG VGCNYGWNFT DCMTNNTCTY 420
  421 GLSNYYQSMS MVSAVAPLIT AGIFGATLSS ALACLVSAPK VFQCLCKDKL YPGIGFFGKG 480
  481 YGKNNEPLRS YLLAYIIAIC FILIAELNTI APIISNFFLC SYALINFSCF HASITNSPGW 540
  541 RPTFRFYSKW LSLLGAVVSV IIMFLLTWWA ALIAIGIVIF LLGYVLYKKP EVNWGSSMQA 600
  601 SSYNMALSQC VGLNQVEDHI KNYRPQCLVL SGPPCARPSL VDFIGAFTKN QSLMICANVL 660
  661 ASGPSPGTAD SMSSTHLKWL NNRKIKSFYH TVVADDLRTG VQMLLQSTGL GRMKPNVLVM 720
  721 GYKKNWRKVQ PGIIENYVGI LHDAFDLQYG VCVLRMKEGL DITRTIQAQV NLGFETSTEQ 780
  781 GLDTNSTAPT SPTIEASLDP ETLMALTQPS TLFQTRQGKK TIDVYWLSDD GGLTLLIPYL 840
  841 LTRKKRWGRC KVRVFVGGEA QQIEEQKKEL KGLISRFRLG FKDIQVLPDI NGAPQSEHIR 900
  901 KFEDFIAPYR VSSVQKDGQE ADEATKEFSW MVSDEEMETF KAKSLRQIRL NEVIQDYSRD 960
  961 AALIVVTMPV GRRGSCPSPL YMAWLEIVSR DLRPPVLLVR GNQENVLTQY CQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle