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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113678661, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.34
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELFQMGPLR LTLLVLLSGV SFGVVELEPV PENQPQSPSA HASQKNITLA VILPLHNTEY  60
   61 PWAWPRVGPA LYWALEKVNS DPNLLAGYHL QLVFNSSENK EGLCSDSVAP LVAVDLKFSY 120
  121 NPWAFIGPGC DYSSSPVARF TTHWEVPMIT SGARALGFNL YSSITNIGPT HKKLGEFVLR 180
  181 MHRHFGWDKH AMLMFNDNKN DDRPCYFAVE GPYTQMREDN ITADDLVFNE DEEPLRYDEL 240
  241 LRDISHKARV VYVCCKWETF RKLMVEFWRQ GFPQEEYAFF FIDLFGRSLQ SHPARPWARG 300
  301 DADDNAAKEA FKSVKILTYR EPQNPEYKDF VSKLKTEAMD MFNFNVEDSL MNLISGSFHD 360
  361 GVMLYSHALN DTMDRSGSRP PGDVVNKRMW NRTYHGVTGL VQLDENGDRE IDFALWDMTD 420
  421 TKTGDYQIVS VYNGSQKQMI LEPGMKVHWL KGRPPPDIPE CGFKNDNPAC LAKTVTMHQM 480
  481 ISIVVCFIFI IIVTVTVFIY RKLKLENELT AQLWRVHWED IQMSNTEKVL RRACSKLTIS 540
  541 LRGSNYGSLL TMDGNFQIYA KTGYYKGNIT AIKYVNKKRI ELTRKVLFEL KHMRDVQNEH 600
  601 LTRFIGACID PPNICILTEY CPRGSLQDLM ESEGITLDWM FRYSLINDIV KGMAFLHNSV 660
  661 IVSHGNLKSS NCVVDSRFVL KITDYGLESF HKDSNLDDVH AFYARQLWTA PELLRADNPP 720
  721 ACGTQKGDVY SFGIILQELA LLKGVFYLEG PCLSPKEIIE RVVEGRWPYL RPLLCPQSHS 780
  781 EEMGQLMLRC WSEDVNERPD FSQIKVLLRK NNCGYGSNIL DNLLSRMEQY ANNLEELVEE 840
  841 RTQAYHEEKR KAEALLYQIL PHSVAEQLKR GEMVQAEAFD SVTIYFSDIV GFTALSAEST 900
  901 PMEVVTLLND LYTCFDAIID NFDVYKVETI GDAYMVVSGL PVRNGKLHAR EIARMSLALL 960
  961 EAVHSFRIRH RPNLQLRLRI GIHSGPVCAG VVGLKMPRYC LFGDTVNTAS RMESNGEALK1020
 1021 IHVSEATRAV LQEFNCFQLE LRGDVEMKGK GRMRTYWLLG EISSNNA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle