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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113678458, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAVVLALTL ALVASQQNKL VPEFAHDKTY VYKYEALLLS GIVQEGLAKA GIQIKSKVLL  60
   61 SAATENTFLL KFVDPLFYEY AGTWPKDQVF PATKLNSALA AQLQTPIKFE YANGVVGKVF 120
  121 APAGVSPSVL NLYRGILNIL QLNFKKTQNI YELQEAGAQG VCKTQYVISE DPKADRITVT 180
  181 KSRDLSHCQE RIVKDIGLAY TETCVECTKR IKSLIETANY NYIIKPSDSG ALIAEATVKE 240
  241 VHQFSPFNEI HGAAMMEATQ SLVFVEFEKA PVVPVKADYM PRGSLQYEFA TEILQTPIQL 300
  301 TKISNAPAQI KEVLKHLVEN NVAMVHDDAP LKFVQLVQFL RAATLKDTEA IWAQFKDKPV 360
  361 YRRWLLDTLP AVATPVVLKF IKEKFLAGEF TLTEFIPTLV VALQMVPADL ETIQWTASLA 420
  421 LHEKIATIPA LREVVMLGYG SMIAKYCVAV PTCPAELLRP IHEIATEAIS KNDIPEITLA 480
  481 LKVLGNAGHP SSLKPIMKLL PVLKTTASAL PIRVQVDAIL ALRSIAKKEP KLVQPVALQL 540
  541 VLERALHPEL RMVACILLFE TKPSVAVMSS LAGALRMETN MQVASFAYSH IKSLTRITAP 600
  601 DMSSVAGAAN VAIKLMNRKL DRLNFRYSRA FQLDFYHTPL MIGAAGSAYM INDAATILPR 660
  661 AVIAKARAYL AGAATDVIEF GLRTEGIQEA LLKSPAADES VDRITKIKRT LRALTNWKAM 720
  721 PSNKPLASAY VKVFGQEMAF GRIDKTIIEQ ALPMVNGPKP RALLKEALKA LQEGISWQRA 780
  781 KPLLVAEVRR ILPTSVGLPM ELSMYSSVVG AATVNVQATI TPPLPEQIET MTLEQLKKTD 840
  841 VQFKAEARPS IAIHKFAVMG VNTAFIQAAV MARGKIRTIA PGKVAARADI LKGNYKIEAL 900
  901 PVELPEHIAS ASFETFAFAR DVEDPSAERT VPLVSVLSLQ NRQSQRLSSE NADSEIETET 960
  961 PVKAPAPFDR TLCYAVPYIE IKGCVEVHSH NAAFIRNSTL FYIIGQHSAR AAVARAEGPA1020
 1021 VEKLEFEVQV GPRAAERLAK QINIIDDETP EGKDFLLKLR EILETESKNA TVSSGSSSSR1080
 1081 SSSSSRSSSS SSSTSNSTSS SSSSSSSSSS MSSSRWSKTL TKMEAFRKFH KDQYKTHHGD1140
 1141 SKSSRSTGSS LEQIQKQSRY LGNTVPPVFA IIARAVRVDR KLLGYQFVAF FDKPSSRVQF1200
 1201 IASSIAENDN FKFCADGVLL SKHKVTSKVT WGAECKEYAV TTKAEAGLLG EFPAFRLEWE1260
 1261 WERLPIIFTT YAKKLSKHIP MAALQAGFNV ERAKNSEKEL ELTVALPSKR TLNVIVRVPE1320
 1321 MTMSRMDIPL PVTFPINPDG TFDVHFYEDI YFRAQNYIYD YTTAQCSMMQ DTISTFNNKT1380
 1381 YKNEMPISCY QVLAQDCTSE LKFVALLKKD EESEKTHLNV KLVDIDIDLY TLGTDAKVKI1440
 1441 NGLEVPISSL PYQHPSGSIQ IREKADGLSL YAPSLGLHEV YFANGDWKIQ VADWMKGQTC1500
 1501 GLCGKADGEI KQEYTTPSGY LTESSVSFAH SWVLPAESCR DASQCRMKLE SVKFEKQVIL1560
 1561 NGQESKCYSV EPVLRCLPGC APVRTTPVTV GYHCMSTASN LNMLAGIYEK SVDLRETTDA1620
 1621 HVACRCTEQC A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle