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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|83763473, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.78
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFGRMCLQY KRAVLLSLMF KLGLFCTVSS EVCLSSPCQN NSTCVPTLDG YLCTCSSSPP  60
   61 IYTGPNCERL LDPCDSAGCP STCIATPGSQ NYTCLCPDGF SGPNCTQNIN ECHSNPCSGV 120
  121 RSFCVDGVNG YSCHCPSGYS GADCGTRVRD CSDDPCFNNA TCVWAPDGYE CHCAAGFRGR 180
  181 NCEEDIDECL SQPCRNGAIC QDAVGVYQCY CVPGFQGFHC EIDINECASQ PCENNGTCVN 240
  241 GRDRYICECL FGFTGLNCEV DVDECEASPC QNGAVCHDHV GLYTCECVPG YEGINCELDI 300
  301 DECESSPCRH GGVCLDMVNG YECDCSGTGF MGFFCDIDIP ECSSDPCQHG ATCLEGVNHY 360
  361 TCICWTGYEG VNCELDVDEC VSQPCENEGQ CFQRSDSSLY RVLPELDTDF SFQSAAGYLC 420
  421 QCVSGFTGEN CSVNVNECES APCENGGSCE DLVNAFQCSC PPGFAGAVCE TELDECESDP 480
  481 CQNRGRCEDS INAYICHCPP AEPGHLPWGG PDCSVQLTGC VDQPCQNNAT CIPSIQHQQH 540
  541 QHTCRCPSGF HGTHCQTSTT FSITRGGYLL IDLHHKNNRS RRYLDSHVPS VQLRFRTTLQ 600
  601 DGVIFFRGGQ NHFFVLELIA GELYCRAQSG DLKLFVKLNG DFGDGFWRGV SVSVDEGLTV 660
  661 LSEGEMGEDG GHNQLLSFQP QGLETLYVGG VPQEWMNLTL SRTGFVGCLE DLVVDSEPVL 720
  721 PQSLVPLQEV QMGCERTEWC RVNPCSDHGR CVDLWSNYTC VCHRPYYGEH CSEEHTSWTF 780
  781 SHERNRSFAA FPIMQNHSRD VTVSLWLRSR HLNGLVLQLQ HDNQPYLTLF LKNGSLYISI 840
  841 YSSIRRASDF LTNGEKLFMS IKTEPGVILF NQTQRIPMIY SGFEVQVGDV VYLGGLPEGE 900
  901 NSALWGGYFK GCLQDVRIDD TQLFMYSGSI SQKPQHANYL PRNSSNVLEG CVGDQTCKMK 960
  961 PCLNGGKCQV IWNDFMCLCP LNFSGKTCET RVWCVSDPCD PRTRCVDLPD GYECLANATF1020
 1021 ENNALKFSAN GSFFEPVMRI SMDLRTREEN GTILRSSNGI EFFCMGLLNS SIIVKFRDSN1080
 1081 SLEVHAFISD VTVSDGEWHK VELYASSSRI SAFRWHMSID GNPAGFSLSP AGNVDFFNSS1140
 1141 TVMLAENYTG CLGEVRIGGV HLSFFGPLNE EAPQKTQFIR IGGMLEPHLG CIGSPLCLSE1200
 1201 PCLNNGTCTD LFNLAVCKCA PGWTGERCQE NIDECGEQPC VQGSCQDLLG DYECRCPVGF1260
 1261 GGKNCDVEVD QCKDHQCENG GSCVATVSGY TCVCLPGHTG PYCRWRFPPR ECDVDLQCEN1320
 1321 GGVCSEGSWG ANCTCRPGFT GVRCELDIDE CVSEPCLNGG SCVNRHNLYF CECLPDFSGE1380
 1381 NCQITKQLQQ ELWPWLLLLV PLAGLSVLLA ALALLCLIFS ARMKRRSEGT YSPSRQEAAG1440
 1441 ARMEMGSVLK VPPEERLI

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