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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|190339690, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGRLILLLF LGAYLVLLAA EVHLITGQGI YINTWAVHIE GGVEEAERIA QKHGFVSHGQ  60
   61 VFGDYYHFQH RGVVRRSLSS HRGVHVRLHT EPQVLWAEQQ IAKRRRKRDI HMEPTDPKFP 120
  121 QQWYLYNPSH GDLNVKEAWA QGFTGRGVVV TILDDGIEKD HPDLAKNYDP DASYDVNDRD 180
  181 PDPQPRYTQL NDNRHGTRCA GEVAAAANNG VCGVGVAYNA KIGGVRMLDG EVTDVVEAQS 240
  241 LSLNSQHIHI YSASWGPEDD GKTVDGPAKL AKEAFLQGVT EGRSGLGSIF VWASGNGGRE 300
  301 RDSCNCDGYT NSIYTLSISS TTQYGSVPWY SEACSSTLAT TYSSGNLNEK QIVTTDLRKK 360
  361 CTDSHTGTSA SAPLAAGIIA LALEANMNLT WRDMQHLVVR TSRPAHLITN DWRTNGVGRL 420
  421 VSHSYGYGLL DATAMVALAQ NWTSMGPQHK CVINMLTEPR DIKNHLTFSR SVEACSGQPD 480
  481 FVSSLEHVQA RLTLSYNHRG NLAVHLISPL GTRSTLLAPR PQDNSAEGFN DWAFMTTHSW 540
  541 DEDPRGEWTL EIENVAGLND YGVLSQFTLI LYGTGSSATD PSVSDYTRPS NNSCKTFDTQ 600
  601 QICIECSTGF SLFLQGCVKS CPPGFISGPQ VLNLSLDNWV EHSTVQACLP CHPACLTCSG 660
  661 SGENECLSCP PHSHLVATSC LHQNQVQRKS PSIPVIQHEA DSSSEESLRD PGLSSRLPAL 720
  721 VAVLSCAFIL ATFAAVFVLL QLHSGAASAP FCRRTKLPVI DTGRGGIRVG FGFGLNRGKV 780
  781 SYRGIPTVWG DEDAAGGMNS ESDSEELEFH SEKTAFIRTQ SVL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle