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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|146218549, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLRLASLTL GTLLVLLTSG PQPSIGQKVY TNTWAVHIEG GEEEADRIAR KHSFVNHGNV  60
   61 FGDYYHFRHR TVVKRSLSEH RGTHIRLHTE PQVMWAEQQV VKRRKKRDVY YEPTDPKFAQ 120
  121 QWYLYNQDHL DLNVKNAWKQ GVTGQGVVVS ILDDGIEKNH PDLVQNYDPD ASYDVNDGDP 180
  181 DPQPRYTQLN DNRHGTRCAG EVAAVADNDI CGVGVAYNAR IGGVRMLDGE VTDVVEAQSL 240
  241 SLNPQHIDIY SASWGPEDDG KTVDGPAKLA KEAFQRGVIE GRGGRGSIFV WASGNGGRMK 300
  301 DSCNCDGYTN SIYTLSISSS TQNGNVPWYS EACSSTLAST YSSGGVNEKQ IVTTDLRQKC 360
  361 TDSHTGTSAS APLAAGIIAL ALEANKNLTW RDMQHLVVRT SNPAHLTTND WKINGVGRRV 420
  421 SHSYGYGLLD AGAIVALAKN WTNVGPQHKC VLSLVSEPRN IGSYLVINKT VDACTGMANF 480
  481 VSSLEHVQAQ LTLSYNRRGN LAIYLISPQG TRSTLLPPRP HDYSSEGFND WAFMTTHSWD 540
  541 EDPRGEWTLE IKNVAGTSDY GTLTQFTLVL YGTASSLSRS STAGSSQTAD SSCKTYDLNQ 600
  601 ICTECNPGFY LYQKGCVRDC PAGFTEGSRP TILNNELSSV LHPACLPCHS VCLTCSGTGP 660
  661 QDCLSCPPHS HLGPLTGTCL HQNQIQRESP DGRLFQAQDD SLSFVHQPAL SSSLPAIVAV 720
  721 LSCAFIVATF VGVFGLLQLR TLGQKKQHLG QEEPGSGLLV GWGLNRTEVA YKGIPSVWRE 780
  781 DEEESENEEF GIHNERTAFI KTQSAL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle