YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: OTOMP_DANRE
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLPGGHLAV VLFLFVLVSM STENNIIRWC TVSDAEDQKC LDLAGNATAR NLRGQLVCVR  60
   61 GQSPTDCMKQ IKNGTADAST MYADEIYTAG FCYGLDVAVG ESYNGVDGIN YYVVALARTS 120
  121 SSDLSLLEMH ERSSCHPGMR TTVGWTVPIG FLVNTSQISV DVQCNFPHAV GDFFGYSCVP 180
  181 GVKDPEHDPK GNNPRNLCEA CIGDENDRHI CANNPRERHF GEAGALRCVA ENLGDVAFVK 240
  241 HTTVFDNMQG KNQESWALDL ELEDLKLLCP DGSEANLFQH ESCHLAVVPT NAVVVRLEDK 300
  301 CRVYKFLERV QNAFGNTTEG FSLFSSVNYG QPDVLFSDST KKLLRVMGTY TSWLGPSYTT 360
  361 ILRAFECEGL C

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle