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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115497644, gi...
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDCSDCVLD SRMNNPSETG KPSMESGDSN TGTQTNGLDF QKQPVPVGGA ISTAQAQAFL  60
   61 GHLHQVQLAG TSLQAAAQSL NVQSKPNEES GDSQQPSQPS QQPSVQAAIP QTQLMLAGGQ 120
  121 ITGLTLTPAQ QQLLLQQAQA QAQLLAAAVQ QHSASQQHSA AGATISASAA TPMTQIPLSQ 180
  181 PIQIAQDLQQ LQQLQQQNLN LQQFVLVHPT TNLQPAQFII SQTPQGQQGL LQAQNLLTQL 240
  241 PQQSQANLLQ SQPSIALTSQ PATPTRTIAA TPIQTLPQSQ ATPKRIDTPS LEEPSDLEEL 300
  301 EQFAKTFKQR RIKLGFTQGD VGLAMGKLYG NDFSQTTISR FEALNLSFKN MCKLKPLLEK 360
  361 WLNDAENLSS DSALSSPSAL NSPGMGIEGL NRRRKKRTSI ETNIRVALEK SFLENQKPTS 420
  421 EEITMIADQL NMEKEVIRVW FCNRRQKEKR INPPSSGGTS SSPIKAVFPS PASLVATTPS 480
  481 LVTSSAATTL TVNPVLPLTS AAVTNLSVTG TTDTTANNTA TVISTAPPAP SAVTSPALSP 540
  541 SPSASAATSE ASSASETSTT QTTSAPLSSP LGTSQVMVTA SGLQTAAAAA LQGAAQLPAN 600
  601 ASLAAMAAAA GLNPGLMAPS QFAAGGALLS LNPGTLGGAL SPALMSNSTL ATIQALASGG 660
  661 SLPITSLDAT GNLVFANAGG APNIVTAPLF LTPQNLSLLT SNPVSLVSAA ATSAGNSGPV 720
  721 ASLHATSTSA 

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