YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LETM1_BOVIN
Protein type: Transmembrane
Type Confidence: 0.74
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASILLRSCR GRGPARLPPP RSAAPRGPAG DLACLSGASA VGLMSYVPLP LGSCAPVRPV  60
   61 YLSLRADPLG CWTLRPKRAC AVLAGPRLLP VRCWHSSRPL GDDSVVEKSL RSLKDKNKKL 120
  121 EEGGPVYSPP AQAAVRKPLG QRVLDELRHY YHGFRLLWID TKIAARMLWR ILHGHSLTRR 180
  181 ERRQFLRICA DLFRLVPFLF FVVVPFMEFL LPVAVKLFPN MLPSTFETQS SKEERLKKEL 240
  241 RVKLELAKFL QDTIEEMALK NKAAKGSATK DFSVFFQKIR ETGERPSNEE IMRFSKLFED 300
  301 ELTLDNLTRP QLVALCKLLE LQSIGTNNFL RFQLTMRLRS IKADDKLIAE EGVDSLNVKE 360
  361 LQAACRARGM RALGVTEDRL RGQLKQWLEL HLHQEIPTSL LILSRAMYLP ETLSPADQLK 420
  421 STLQTLPEIV AKEAQVKVAE VEGEQVDNKA KLEATLQEEA AIQQEHREKE LQRKSQAAVA 480
  481 QAAKEVEPEV VAEGAPGRPV AELQPEEPAV TLPSEVLKDS APVLEGLKEE EITQEEIDVL 540
  541 SNACSKLKEQ KKSLTKEKEE LELLKGDVQD YSQDLQEIKK ELSKTGEEMY VEESKASKRL 600
  601 TKRVQQMIGQ MDSLLAQLEA DQKAGRLGPA AEAAPAGETV ISVSELINAM KQIKHIPESK 660
  661 LLSLASALDD NKDGKVDIDD LVKVIELVDK EDVHISTSQV AEIVATLEKE EKVEEKEKAK 720
  721 EKAEKEAAEV QN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle