YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PGRC1_BOVIN
Protein type:	Transmembrane
Type Confidence:	0.62
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAEDVAATG ADTSELESGG LLQEIFTSPL NLLLLGLCIF LLYKIVRGDQ PAASDSDDDE  60
   61 PPPLPRLKRR DFTPAELRRF DGVQDPRILM AINGKVFDVT KGRKFYGPEG PYGVFAGRDA 120
  121 SRGLATFCLD KEALKDEYDD LSDLTPAQQE TLSDWDSQFT FKYHHVGKLL KDGEEPTVYS 180
  181 DKEEPKDEST RKND

Type	Start	End	Confidence
Non-Cytoplasmic	1	24	0.84
Transmembrane Helix	25	46	0.55
Cytoplasmic	47	194	0.50