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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RSN1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSTNSTNST TTATSTNTST QQVVTSLVSN GTIFGVFVIA FLILRIKLKR IYEPKSSFNL  60
   61 INEEKKPEPL PQGVWQWLKP LLKKSDNFVI QQAGLDGYFF LRYLFIIAIY CAVSMSYIFP 120
  121 ILLSINASNG NHESGLNQLA YQNVKHRGRY FAHVFCGWIF FWGFLYIIYR ELYFYTSMKQ 180
  181 AVLASPRYAK KLSSRTVLFQ TVPKQYLSEE EFSKLFDGVK RVWIARGSGS IEAMVKARDN 240
  241 MAIQLEGAET KYLKAALKKI KKLNKKSPQL SVSDNIAEYV PDKKRPHHKI NKVAKFFFGK 300
  301 KVDTISYIKE ELPKLNQKVK ALQEDHENSS PFNSVFVEFE SQYQAQVAAQ ITTYHAPLFM 360
  361 TPVYIGIEPS DVVWFNLRMF WWERLGREVS AVSAIVALVI LWAFPVAFVG MISNITSLTN 420
  421 EVKWLKFIYK LPKQLLGLLT SLAPTVALAV LMSFLPKFIR GMAITQGAPS KQNVEYFTQQ 480
  481 AYFAFQVIQV FLVTTLSSAA TSTVTEIVKE PTKAMDLLAS NLPKASNFFM SYVILQGLSI 540
  541 SSGALLQIVP LILFYVLGAF LDGTVRKKWN RFCGLSSMQW GTAFPVYTNL AVITFSYSII 600
  601 SPLILLFAAV AFFLLYIAYL YNLTYVYQES PDARGIYYPR ALFQTIVGIY IGQICLLGLF 660
  661 AVGKGWGPIV LQVIGICVTV LIHLHLSAAF DHLSKVIPVD TMKPLDGVSD TPSFKNIYKG 720
  721 IESTKVKKNT FGANIDMDGI KELPEFPIKK YHKRSESVTE QQVENSIFSE NTFEYQFNPA 780
  781 NEANADGHAI NAENLIEDVP LLADGDTMKI PPAPWWKRFL KPHIYYSYKA VKSRLPEIYG 840
  841 LVDPDERVND FDISHAYDYP AVSAQCPELW IPRDPFGFSK LLISDVSGVV EMNDENATID 900
  901 ENLKFTLRDV PPPYNDVKDE ANGEANGEFD TASKENNPFA DPKYKEEESR SAV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle