YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|111494096
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDTLRRLAGR GFQALNGELS LLCGRRRRPM SRVLQKDAEQ ESQMRAEIQD MKQELSTVNM  60
   61 MDEFARYARL ERKINKMTDK LKTHVKARTA QLAKIKWVIS VAFYVLQAAL MISLIWKYYS 120
  121 VPVAVVPSKW ITPLDRLVAF PTRVAGGVGI TCWILVCNKV VAIVLHPFS

Type	Start	End	Confidence
Cytoplasmic	1	96	0.97
Transmembrane Helix	97	116	0.94
Non-Cytoplasmic	117	138	0.87
Transmembrane Helix	139	162	0.81
Cytoplasmic	163	169	0.78