YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YMR245W
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVCSLLKSMT LFSLKYLIQL WAQFSSNFSF STLQCDFILL LFLGSIASKM SALSKHWKNA  60
   61 SLDSQHNFLC ERVLGGCDSF LPPSNENKPI AILLLFLSVY SCIYVPAQRY NSTRLCMYVC 120
  121 MYVGESSPPF YKAAPTTAAP FHMSVSFVQL SYNRQSHFLP RGRARFCWIC SGANIPSRNG 180
  181 QGPDNTIGHL HHNAQGQKFI HDNNTN

Type	Start	End	Confidence
Cytoplasmic	1	20	0.48
Transmembrane Helix	21	47	0.59
Non-Cytoplasmic	48	89	0.64
Transmembrane Helix	90	107	0.58
Cytoplasmic	108	206	0.60