YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SSO2
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNANPYENN NPYAENYEMQ EDLNNAPTGH SDGSDDFVAF MNKINSINAN LSRYENIINQ  60
   61 IDAQHKDLLT QVSEEQEMEL RRSLDDYISQ ATDLQYQLKA DIKDAQRDGL HDSNKQAQAE 120
  121 NCRQKFLKLI QDYRIIDSNY KEESKEQAKR QYTIIQPEAT DEEVEAAIND VNGQQIFSQA 180
  181 LLNANRRGEA KTALAEVQAR HQELLKLEKT MAELTQLFND MEELVIEQQE NVDVIDKNVE 240
  241 DAQQDVEQGV GHTNKAVKSA RKARKNKIRC LIICFIIFAI VVVVVVVPSV VETRK

Type	Start	End	Confidence
Cytoplasmic	1	267	0.97
Transmembrane Helix	268	291	0.90
Non-Cytoplasmic	292	295	0.93