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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113476999, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTRIFSITY LAQTCLAAIV IINGLEALVV QPVWAQTYVF PQEPSTTEAT EELIINGTLN  60
   61 ENSELLEDGS YFQWHTFTGK AGEAITIELS SSEFDAYLML VDPRSNKIAE NNDGGENNNA 120
  121 KITITLPTTG TYTVIVNTYE KGQQGSYKLS WRQASAKDQS LASATELNDK AIELYKQGKY 180
  181 DEAVPLLEQS LKIRQQALGA EHPDVAASLN NLAFLYNAQG RYTEAEPLYI QALEMRKKLL 240
  241 GAEHPDVASS LNNLAFLYKA QGRYTEAEPL YIQALEMRKK LLGAEHPDVA TSLNNLASLY 300
  301 ESQGRYTEAE PLYIQALEIF KKLLGAEHPD VATSLNNLAF LYNAQGRYTE AEPLYIQALD 360
  361 MTKKLLGAEH PSVATSLNNL ALLYEDQGRY TEAEPLYIQA LEMRKKLLGA EHPDVATSLN 420
  421 NLAGLYNAQG RYTEAEPLYI QALEMRKKLL GAEHPDVATS LNNLASLYES QGRYTEAEPL 480
  481 YIQALEIFKK LLGAEHPDVA SSLNNLAGLY KDQGRYTEAE PLYIQALEMR KKLLGAEHPD 540
  541 VASSLNNLAA LYKDQGRYTE AEPLYIQALE MRKKLLGAEH PDVASSLNNL AGLYNAQGRY 600
  601 TEAEPLYIQA LEMRKKLLGA EHPLVASSLN NLAGLYNAQG RYTEAEPLYI QALEIFKKLL 660
  661 GAEHPLVATS LNNLAGLYNA QGRYTEAEPL YIQALEMRKK LLGAEHPYVA TSLNNLALLY 720
  721 YAQGRYTEAE PLYIQALEMR KKLLGAEHPD VASSLNNLAT LYNVQGDIAS AVQYLKRGLE 780
  781 VQEKNLTYNL AAGAEPQKNK YLQTISGAKA RAISLHLQTA PNDPAATTLA LTTILRRKGR 840
  841 LLEFFTTSRQ ILRQQLDTQG LQWLDELNNI YSELSTLLYN GPKDLPLETY KENFALLEQQ 900
  901 AKELEDKISR RSSQFRAATQ PVTLEAIQEL IPANAALVEF VQYSPFDPKT GKFGKPRYGV 960
  961 YVLSREGEPQ GMDLGTVEEF KNIIKVFRTS LRDKSQTPLK QLKDTARELD QKLMQPVRQL1020
 1021 LGSQKQILIS PDSNLNLIPF EALVDENNRF LVENYSFTYL SSGRDLLTFT STPRNTSPAV1080
 1081 LLGYPTYSEK DQVTIKSKGR FGVSDLGLSG LPGTEEEVKA IGELLGVEPL LREAATEEAV1140
 1141 KQVQSPFILH IATHGLFETI EDPEKYPTIN KNSLLRASLA LAGVKEEQID GDNGLLTALE1200
 1201 AAGLNLLGTE LVVLSACDTG LGGISPGEGV YGLRRAFAIA GSQSQVISLW KVDDQGTKDL1260
 1261 MVKYYQRLLG GDMGRTEALR QTQLEMLGGE AGEKYSHPYF WASFIPSGNW LAIPPRVESK1320
 1321 KSKVNSQR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle