YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YMR172C-A
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYLCYTCFFL PSYDCKRLFT IVRAYIPARL SCNQPMVLFF TSPSSSSLYS LLFSKVSIIS  60
   61 CAVLPLSIPF RMNLYNLFRL EKVFLFLLSL HLLPYLASRC LIDGFPLIPV SYSSHIVFTS 120
  121 VGAFNIL

Type	Start	End	Confidence
Non-Cytoplasmic	1	47	0.48
Transmembrane Helix	48	70	0.79
Cytoplasmic	71	82	0.56
Transmembrane Helix	83	116	0.60
Non-Cytoplasmic	117	127	0.46