YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|151945836
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLKDRYLNL ELKLINKLQE LPYVHQFIHD RISGRITLFL IVVGTLAFFN ELYITIEMSL  60
   61 LQKNTSEELE RGRIDESLKL HRMLVSDEYH GKEYKDEKSG IVIEEFEDRD KFFAKPVFVS 120
  121 ELDVECNVIV DGKELLSTPL KFHVEFSPED YENEKRPEFG TTLRVLRLRL YHYFKDCEIY 180
  181 RDIIKNEGGE GARKFTISNG VKIYNHKDEL LPLNIDDVQL CFLKIDTGNT IKCEFIL

Type	Start	End	Confidence
Cytoplasmic	1	35	0.79
Transmembrane Helix	36	56	0.82
Non-Cytoplasmic	57	237	0.92