YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DLT1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGFAKLKSW LYKASLFVSL ILLIGFSVVL PIDSIAQASK SENNAFNTFI VVGALVVFGV  60
   61 FCIFIIIGRM LFHKSCLKDI PRRYIPITPA DLPHRSSREA VLQNMERSKE LTILLKKPKD 120
  121 PVIHDGLEPP RRCDYPLDEK LFPEYLNYAD CIKSLTDRLK YHGLFLNNLD VRMNLEDTFA 180
  181 DVVNSQFVNH NANKIQLEKA KEFIDLYETI RFSGKDVTRD QFIKFVKFCL YFGEVSLTRD 240
  241 TSFANLHNFR LNGSSNNIGR TESKYSINPF DENEYAQDDM HYFPEPPTHL VRESSISTVA 300
  301 RHVSSGVDLT NSEEHPLDTD SDCNALRLKL SKADSYRSVI RH

Type	Start	End	Confidence
Cytoplasmic	1	9	0.94
Transmembrane Helix	10	32	0.87
Non-Cytoplasmic	33	48	0.81
Transmembrane Helix	49	72	0.89
Cytoplasmic	73	342	0.97