YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PKR1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANFFVRLWE SVFEPGTSPQ LIIATHVSFV ALLLTLIWLI YATNGNIHFY ALFCISLLLW  60
   61 ITVIWFINEL SHVKLKDNDE LDKDANKKDD SAIKEDSEDK QESGKSTSTA RRTQAQSRSR 120
  121 KA

Type	Start	End	Confidence
Cytoplasmic	1	20	0.89
Transmembrane Helix	21	41	0.96
Non-Cytoplasmic	42	46	0.82
Transmembrane Helix	47	67	0.95
Cytoplasmic	68	122	0.92