YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|190408324
Protein type:	Globular with Signal Peptide
Type Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHKTHSTMSG KSMKVIGVLA LQGAFLEHTN HLKRCLAEND YGIKIEIKTV KTPEDLAQCD  60
   61 ALIIPGGEST SMSLIAQRTG LYPCLYEFVH NPEKVVWGTC AGLIFLSAQL ENESALVKTL 120
  121 GVLKVDVRRN AFGRQAQSFT QKCDFSNFIP GCDNFPATFI RAPVIERILD PIAVKSLYEL 180
  181 PVNGKDVVVA ATQNHNILVT SFHPELADSD TRFHDWFIRQ FVSN

Type	Start	End	Confidence
Signal Peptide	1	26	0.66
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	224	0.99