YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TVP18
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALSLGQFIN VGGMVKDLKS FNFSVYGRWF GYINIILCIA LGIANLFHVS GVIAFGIISI  60
   61 IQGLVILFIE IPFLLKICPL SDNFIEFIKR FETNGWRCLF YLAMAIIQYI SIAVMATSLI 120
  121 VVAVGLTISS ISYAVAYTKH QEFQNTNIIK NPTDDDFPHE AVVREML

Type	Start	End	Confidence
Cytoplasmic	1	25	0.94
Transmembrane Helix	26	47	0.88
Non-Cytoplasmic	48	52	0.66
Transmembrane Helix	53	75	0.88
Cytoplasmic	76	97	0.80
Transmembrane Helix	98	131	0.78
Non-Cytoplasmic	132	167	0.54