YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	BUB2
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.43
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSIEDLISN PPLLLHSSLS QLRYLILSEG LPISEDKQQQ RTRCYVWTVL SQTSMEASTQ  60
   61 RYLALLKLGP PSTTIYQKIK NDTSRTFQTD PNFRNRVSED ALIRCLSCFA WQTQQRRQKT 120
  121 RFGRIPVSTY VQGMNVLLAP LLYSCPSEPM AYQLFTKLCY EMIPTYLTKN LNGAQNGAKL 180
  181 LDISLRIIDP KLSKFLSDNL LTAEIYGMPS ILTLSSCNKP LDQVIKLWDF MFAYGFHMNI 240
  241 LFVVAFLVKM RSKVFKSDSP VNLLRQFPDF DADEIIRLGV GFIAKIPAQI YDLLVDHLTD 300
  301 PDIYIP

Type	Start	End	Confidence
Cytoplasmic	1	124	0.56
Transmembrane Helix	125	143	0.43
Non-Cytoplasmic	144	229	0.87
Transmembrane Helix	230	248	0.82
Cytoplasmic	249	306	0.79