YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|190408277
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVYLAVLFS LLVIEMAILF ILVLPLPQRM RRWLYIRYSI ISTNKKFRTY MVGIMIFVGL  60
   61 LFIDSWKRSQ IRVSTYRNQK NPYIINSVTP VDALASRAYN QRNVYISGFI IYFYICILTV 120
  121 MSILRRIVEW NDKMKAGDDI LKEKLRRKQK YLEELQKKKF

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.89
Transmembrane Helix	6	26	0.96
Cytoplasmic	27	46	0.95
Transmembrane Helix	47	66	0.94
Non-Cytoplasmic	67	103	0.98
Transmembrane Helix	104	125	0.88
Cytoplasmic	126	160	0.95