YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YML131W
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLAKQWVLK NLPTPGEPFN FHFHDPACTF ELIEKELSSE QLKDGELLLE TTYLSNDPAQ  60
   61 KFWISSMDKN YAKGVQPGEI IPARGIGKVL ASRNKAFSPG DYVSAVTGWT THAIISQENV 120
  121 QGLRKLDKNK VGKLWWYLSV LGGTSLTAYF IFFTYAQLQE REEDYGKVYL ISGAAGAVGT 180
  181 VCIQLALNVF KASKVIAIAG GPEKVAFVES FGDNVVGVDY KDPSFKQKLI EAAGGENTVD 240
  241 YFIDNVGSNV LEAGVLLLKQ RAMLIACGAI SAYNDPSKFV FKGYSFILTK RLVVKGVLVT 300
  301 DNIDDFPKAL DKLGSLVKHG KIDLLKSATL EDGTGDKFKN VPLIWKGLFS GVNKGKLITK 360
  361 VNNEE

Type	Start	End	Confidence
Cytoplasmic	1	133	0.98
Transmembrane Helix	134	153	0.97
Non-Cytoplasmic	154	167	0.82
Transmembrane Helix	168	190	0.76
Cytoplasmic	191	365	0.84