YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AIM33_YEAST
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIVETCISF VSTNPFYPFC TGLLLNCVVT PLYFWKTQNG RIVVVSLLQF VVLYATAFIS  60
   61 IGTDKSLYRN KWVALPLSKK TRISRNTSLY CFKLKYPFER LHIPMGYHLA VRVTINGERL 120
  121 VRYYTPVNVP NTEGHLELVV KTYKHGVVSK YFDKLKIRQY VEFKGPLGEL EYDQDTATEL 180
  181 GIIAGGSGIT PVLQVLQEII PSPEDLTHIS LIYANETEDD ILMKSQLDHM AKEYPHFKVH 240
  241 YVIHKPNGKW NGDVGYVTLE EMKRYLPKQA EDHRLLICGP PKMNEMVLNY AKELGWSNGF 300
  301 HKGNGTDKVF VF

Type	Start	End	Confidence
Cytoplasmic	1	14	0.50
Transmembrane Helix	15	35	0.80
Non-Cytoplasmic	36	41	0.51
Transmembrane Helix	42	62	0.86
Cytoplasmic	63	312	0.50