YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GSF2
Protein type:	Transmembrane
Type Confidence:	0.69
Topology Confidence:	0.39
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIYIRLNAD VEHDYAFQVS NEDTINNKIK KIFPSKTGLA DLMVLRPSIF HEKEPVKFYK  60
   61 SIHPGYLSEG GCLMFHYEAD NEENLEELND SKPLIDQLWP GQLVVPEWKL SKKNIWVYTI 120
  121 IMLAWLYTDL PDAISPTPGI CLTNQLSRLL IPVAKHMDLP EIAAKLEQEV QANYSSLVAQ 180
  181 WLFFVMHIFK VGIITLFLKL GIANPISFNP YKLWSLRDLT SPSANGAKNS GGNNNTTDLK 240
  241 TRLRSLGWIG AKRATYDDYQ TNYYNYVIDK MGGAVAAYRA GAIRKAAAPG IQLVAGEGFQ 300
  301 SPLEDRFTAS TFTAIKTERK FILSEEYFVE LENNLKKILE EYDGDIGKMN AEIRRFRRFG 360
  361 IYEPDEKLAS LVKLRREIAD EKEKASNNDA TFGIKKNDLK KSN

Type	Start	End	Confidence
Cytoplasmic	1	113	0.57
Transmembrane Helix	114	128	0.39
Non-Cytoplasmic	129	182	0.78
Transmembrane Helix	183	203	0.57
Cytoplasmic	204	403	0.50