YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RCF1_YEAS8
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRMPSSFDV TERDLDDMTF GERIIYHCKK QPLVPIGCLL TTGAVILAAQ NVRLGNKWKA  60
   61 QYYFRWRVGL QAATLVALVA GSFIYGTSGK ELKAKEEQLK EKAKMREKLW IQELERREEE 120
  121 TEARRKRAEL ARMKTLENEE EIKNLEKELS DLENKLGKK

Type	Start	End	Confidence
Cytoplasmic	1	32	0.89
Transmembrane Helix	33	52	0.83
Non-Cytoplasmic	53	67	0.78
Transmembrane Helix	68	87	0.91
Cytoplasmic	88	159	0.84