YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	OST6_YEAST
Protein type:	Transmembrane
Type Confidence:	0.59
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKWCSTYIII WLAIIFHKFQ KSTATASHNI DDILQLKDDT GVITVTADNY PLLSRGVPGY  60
   61 FNILYITMRG TNSNGMSCQL CHDFEKTYHA VADVIRSQAP QSLNLFFTVD VNEVPQLVKD 120
  121 LKLQNVPHLV VYPPAESNKQ SQFEWKTSPF YQYSLVPENA ENTLQFGDFL AKILNISITV 180
  181 PQAFNVQEFV YYFVACMVVF IFIKKVILPK VTNKWKLFSM ILSLGILLPS ITGYKFVEMN 240
  241 AIPFIARDAK NRIMYFSGGS GWQFGIEIFS VSLMYIVMSA LSVLLIYVPK ISCVSEKMRG 300
  301 LLSSFLACVL FYFFSYFISC YLIKNPGYPI VF

Type	Start	End	Confidence
Non-Cytoplasmic	1	188	0.91
Transmembrane Helix	189	208	0.93
Cytoplasmic	209	216	0.86
Transmembrane Helix	217	236	0.93
Non-Cytoplasmic	237	263	0.97
Transmembrane Helix	264	288	0.89
Cytoplasmic	289	299	0.90
Transmembrane Helix	300	323	0.88
Non-Cytoplasmic	324	332	0.96