YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YML009W-B
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRMEAQVVAV SPHGVVLPLG VAKVMEVHPL GAVLAAVPQL GAAKVLVLLL LGVVLQPGVT  60
   61 NQVGAVHPLG RRVVNLMVPC LLGVVPVIGQ PTAGLPPGEE ITIIKVQEMA ELLHGVTKTM 120
  121 EIGLLGTTKE ISQTMVVTVH GEVINHQKEN QYHPRRNQ

Type	Start	End	Confidence
Cytoplasmic	1	8	0.59
Transmembrane Helix	9	25	0.48
Non-Cytoplasmic	26	39	0.55
Transmembrane Helix	40	60	0.67
Cytoplasmic	61	72	0.56
Transmembrane Helix	73	93	0.59
Non-Cytoplasmic	94	158	0.76